YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLMU_CAMJR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTSILILAA GLGTRMKSQK PKVLQELCQK SMILHILKKA FALSDDVSVV LSHQKERVEK  60
   61 EILEYFPKTQ ILEQDLQNYP GTAGALRGFE PKNERVLILC GDMPLVEQTS LEALLSNNAK 120
  121 LNLAVFKARD PKSYGRVVIK NDSVEKIVEF KDANTQEKEI NTCNAGVYVI DSRLLKELLP 180
  181 LIDNNNAAKE YYLTDIVKLA KEKDVMIKAV FVDEDEFMGI NDKFELSIAE NFMQEKIKKY 240
  241 WMQQGVIFHL PQSTFIGADV EFVGECEVYE NVRIEGKSKI INSIIKSSSV IENSIVENSD 300
  301 VGPLAHLRPN CELKNTHIGN FVECKNAKLN TVKAGHLSYL GDCEIDSGTN IGCGTITCNY 360
  361 DGVKKYKTII GKNVFVGSDT QFIAPVKIED EVIIAAGSTV SVNVEKGALF INRAGHKMIK 420
  421 DYYYKKFQK

Type	Start	End	Confidence
Signal Peptide	1	18	0.85
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	429	0.99