YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57166464, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIILIFIS FFALNLSAKD LVVGMELGYP PFEMSDKTGK ASGISVDFLE AFAKKNGYKL  60
   61 VVKNIAWDGL IPALKTAKID LIMSSMTITD ERKKVVDFSI PYAKANLAIL TPLNSDITNI 120
  121 KDLDKKGKVL ALKRGSTGHL YAVKNLKNAT INLFDKENAA ILEVIQGKAD GFFYDQLTIY 180
  181 RTWQKHQDTT RAILAPFQEN PEFWGIAVQK GNAELKKELD EFIAESKKDG LFDSLGEKYL 240
  241 KDVKDTFKKN NLEFFF

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	256	0.99