YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57166156, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNDFLQTLY LTFKLAFITT FILFFIGVFL AYLLSFVKFP FKSLVQTFVA LPLVLPPSVL  60
   61 GFYLLISFSQ NSFLGQFLKE YFNLSLVFSF EGLIFASLIF SLPFMVNPLQ SAFSSINQNL 120
  121 LDASYALGKG KIYTLFRVIL PNSKVGIFSA CAMSFAHTIG EFGVVMMIGG HKKGETLVAS 180
  181 IAIYDELEVL NYTLAHQYAF TLFAISFAIL LSLYFVNKKI AL

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.80
Transmembrane Helix	15	36	0.93
Cytoplasmic	37	43	0.79
Transmembrane Helix	44	66	0.90
Non-Cytoplasmic	67	83	0.79
Transmembrane Helix	84	106	0.86
Cytoplasmic	107	139	0.82
Transmembrane Helix	140	160	0.79
Non-Cytoplasmic	161	194	0.87
Transmembrane Helix	195	216	0.91
Cytoplasmic	217	222	0.88