YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57166154, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKITLFLLF LNLVFGQDKI LNNWFKEYNT SGTFVFYDGK TWASNDFSRA METFSPASTF  60
   61 KIFNALIALD SGVIKTKKEI FYHYRGEKVF LSSWAQDMNL SSAIKYSNVL AFKEVTRRIG 120
  121 IKTMQEYLNK LHYGNAKISK IDTFWLDNSL KISAKEQAIL LFRLSQNSLP FSQEAMNSVK 180
  181 EMIYLKNMEN LELFGKTGFN DEQKIAWIVG FVYLKDENKY KAFALNLDID KFEDLYKREK 240
  241 ILEKYLDELV KKS

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	253	0.99