YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57237334, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDIKSI LLIGSGPIVI GQACEFDYSG TQAAKTLKEL GYRVVLINSN PATIMTDPEF  60
   61 ADATYIEPIT KESILSIIKK EKIDAILPTM GGQVALNVAM EVYESGLLGD VKFLGANPGA 120
  121 IKKGEDRQVF KECMKKIGMD LPKSMYAYNY DEALKAVDEI GFPLMIRASY TLGGAGSGVV 180
  181 YNMDEFKELA NTALALSPIH EILIEESLLG WKEYEMEVIR DRADNCIIVC SIENIDPMGV 240
  241 HTGDSITIAP ALTLTDKEYQ VMRNASFAIL REIGVDTGGS NVQFAINPKN GRMIVIEMNP 300
  301 RVSRSSALAS KATGYPIAKV ATLLAVGFSL DEIKNDITGT PASFEPVIDY IVTKIPRFTF 360
  361 EKFPGANTTL GTAMKSVGEV MAIGRTFKES IQKVLCSLER SLSGFDRVKF EDRNDLVFKI 420
  421 RNANEKRLLY VAQAFREGFS VEELYELCKI DPWFLTQIKE IVDFEEQIDM DILNNKALLR 480
  481 KAKTMGFSDK MIALLVNLKD NLELSQNDIY YARMKQKIIA EFSEVDTCAG EFEALTPYLY 540
  541 SSINVSELTQ SKNDTKDKKE KKVMIIGGGP NRIGQGIEFD YACVHASFAL KDMGIKTIMY 600
  601 NCNPETVSTD YDTSDILYFE PIDFEHLRAV IEREKPDGVI VHFGGQTPLK FAKRLSAFGA 660
  661 KIIGTSSRVI DMAEDRKKFA EFITKLGINQ PKNSTATSVE EAVLKASDIG YPVLVRPSYV 720
  721 LGGRAMRVVN DEAELRFYIQ EAVDVSDKSP VLIDQFLDNA TEIDVDAICD GKDVYVAGIM 780
  781 EHIEEAGIHS GDSACSLPPC NIDEKMQEFI AQKTADIALN LGVVGLLNIQ FALHNNELYM 840
  841 IEVNPRASRT VPFVSKAMGI PLAKVATRVM WQGNLKEALK FYDTFKVVNF DTKILRPKTP 900
  901 KYMSVKEAVF PFAKLSGSDL ELGPEMRSTG EVMGISKDFA NSYAKSQIAS FNHLPEQGVV 960
  961 FISLKDKDKK YTKKIAAEYV KLGFKLMATG GTCKEILESG FECELVHKIS EGRPNVEDKL1020
 1021 KNGEIHLVIN TSDSHSFKGD TKKIRENIIR FKIPYFTNLR SALAGAKSIK AIQSKSCLDV1080
 1081 KSLQEWLKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle