YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57237314, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPKYHFLNN ARYALEGLFA LFKNEMAFKI ELCIIIPAIV FSFFLKISFL EHLLLISVLI  60
   61 LILIVEALNS AIEACVDLIT NEWHEKAKIA KDCASAAVFF SVLLALFVWG FILYNIYL

Type	Start	End	Confidence
Cytoplasmic	1	26	0.91
Transmembrane Helix	27	47	0.87
Non-Cytoplasmic	48	52	0.69
Transmembrane Helix	53	72	0.90
Cytoplasmic	73	92	0.78
Transmembrane Helix	93	113	0.94
Non-Cytoplasmic	114	118	0.74