YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57237266, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIISVLIL ALSLLNAKSF EESKKELVKF YNDLGSSYWY DFYCQAPFKV NKKGKYISFE  60
   61 VIKSDLYAPR NEYTKKGKIN QRIKRIEWEH IMPAQNFGKH LPCWKEGGRK ACKNDPTFAK 120
  121 MEADKQNLVP AIGEINGDRS NFRYAEAPTN LKYTQYGNCK VYTDFKAKRF YPANYSKGWI 180
  181 ARSYLYMSKT YNIRLSDQER KLMEAWDKQY PMDEKEKRIR ALL

Type	Start	End	Confidence
Signal Peptide	1	19	0.96
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	223	0.99