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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57237233, gi|...
Protein type: Transmembrane
Type Confidence: 0.76
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENAGSIGIG VILGLAIKNA SAVGKVVKDF SNLEKIAAKT KLGINGLQKE LNTLKLNANL  60
   61 RAELKAQRKG LQDEFLSLGN VIRGGIIGKG LGEAISFESA MADVRKVVNF DEGDDIKKMS 120
  121 ADILKMSQTL PVTANELAAI AAAGGQIGLG SKDVREFTNL VTKMKVAFDM SAEDVGDSVA 180
  181 KIKNILGISL KDMEDLGDSI NNLSDNSASK AREIIDVMKR TAAAGKQIGF TKEQIAALSS 240
  241 SFISLGKGPE VAGTAINSLY RVLATADNMG TKTESAFAKL GISGAFLKQA SFDDPQKALD 300
  301 MFLQRISKLD QKEQMGVLVD IFGREFADDM ATLVGGLDTY KEALKNAGDE AKKGSLQREF 360
  361 DTRAATTENS IILMKNAFNS LAVNLGSVFL PAISWVSAGI SYLVNSITYI TGLVPGLNGV 420
  421 LGGLIATFLL AKPAVLAYAI AKNYLKDCTI LLKSALIKTR IHLLAFRNSC ILSNITLKAK 480
  481 TVTTTIYTTS LKALSFVLGG LNKVFKAVAI GIRVLSMAMM SNPIGLILGG IAIVAGLIIA 540
  541 NWDKVKSWFK SFIEWLKPVW EPIYNVIKAV FDKCALVFTS FKDIIMSVAS PLAEFLNSIW 600
  601 QGVGDFFYSI FGSLFDWFAS KLSWVGDMIS SISGFIKDAL DFVGLGDDEE VKISQSEQNK 660
  661 EKVFTTNTYK DELAETKSIN HAPSFNNGNI NISVNGTFNI ATKDGNFNMQ EFANTIQKSV 720
  721 FDALRKQEQN KINTTIYG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle