YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57237137, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIAIIGLGL MGGSLGLCLK ENKLISCVYG MDLSKENEKD ALQLGLIHEL IEFKDLALCD  60
   61 MIFVATPVDA IIAILQKLVD LPSNVTIIEL GSTKRKIIES LPKNLIKQTL FAHPMTGTEN 120
  121 SGPKAAFKEL YKDAVCVLCD SEIADDLHQK RAVEIFSHLG MKIVFMDSKA HDHHAAIISH 180
  181 LPHVISFSLA NFVMKEEDKR NIVHLAGGSF KGMSRIAKSS PQMWESIFLQ NKDNLLSSID 240
  241 FFQQELERCK QMIQLDKNDE LREWMKQANT LREIL

Type	Start	End	Confidence
Signal Peptide	1	16	0.90
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	275	0.99