YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57237116, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFEAIFHFF NSSSIITYIV LLWLSLYFIL AFSILFARLT YLATWRNKEK ESLETLLLGE  60
   61 KDLSRTDSIL RKCNDTTSNH LEIYKNLASR RASAGLTWLS IIASTSPFIG LFGTVISILE 120
  121 TFGGLETQNS LSLIAPKISE ALVATGCGIL VAIPAYTFHL IIKRKAFELL SIIDSEIKVI 180
  181 SSSK

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.96
Transmembrane Helix	15	39	0.87
Cytoplasmic	40	94	0.97
Transmembrane Helix	95	119	0.89
Non-Cytoplasmic	120	140	0.88
Transmembrane Helix	141	162	0.91
Cytoplasmic	163	184	0.99