YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57165890, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIICLFLS FNLAFANLEN FNVGTWNLQG SSAATESKWS VSVRQLVSGA NPLDILMIQE  60
   61 AGTLPRTATP TGRHVQQGGT PIDEYEWNLG TLSRPDRVFI YYSRVDVGAN RVNLAIVSRM 120
  121 QAEEVIVLPP PTTVSRPIIG IRNGNDAFFN IHALANGGTD VGAIITAVDA HFANMPQVNW 180
  181 MIAGDFNRDP STITSTVDRE LANRIRVVFP TSATQASGGT LDYAITGNSN RQQAYTPPLL 240
  241 AAILMLASLR SHIVSDHFPV NFRKF

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	265	0.95