YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57165882, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQILKSFFKA LGCGIKFINT YFKTFVLLLI VIWILMPSAN SSSNLANLER IDLKGEIFDS  60
   61 SAVLEKIINA KNDSNIKGVL FVIDSPGGAF APSMELALAI KDLKIKKPVL VYASGTMASG 120
  121 SYLAGVGANK ILANPASFIG SIGVIMQGAD LSGLANKLGI KEQTIQAGEF KSAGTFARAW 180
  181 NENERNFLQG LIDQSYDLFT GFVVKERALD LNKKDQWANA RVFLAAKAKE LGLIDELSNY 240
  241 ENAKKELEKL ANVSNPVWKE EDKIDKFLNR LEGQTSSLIS KSLIEIAYKT NSSFINAR

Type	Start	End	Confidence
Signal Peptide	1	41	0.55
N-region	1	32
H-region	33	38
C-region	39	41
Cleavage Site	41	42
Non-Cytoplasmic	42	298	0.92