YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CORA_CAMJR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLYIYIKTQN ALVQRINFNL DSQELPQNIL WIDLLHPSAA EIAFISSEFN LEFPTKEERE  60
   61 EIELSAKYWE DNATITINAH FLVRDLKNDE EDRNLIKLRT EIVTFATAKN ILFTIRYNEF 120
  121 STFEEIQARI LASPKNFEDG FDIIDKMFEV RVEKDADLLE WIDKEARRLR TSVLEKKDEY 180
  181 SYDEMLKDIS SLQELNMRVR DSLFDKRRAM TSLLKSDKID KDIKQNLTIV LKDLNSLVEF 240
  241 SVSQLNILDN IQTILASQIN IEQNKIIKIF TVATVAMMPP TLIGTVYGMN FKFMPELELH 300
  301 YAYPIVLGVM VISIILPLVV FKKKGWL

Type	Start	End	Confidence
Cytoplasmic	1	265	0.91
Transmembrane Helix	266	289	0.84
Non-Cytoplasmic	290	299	0.84
Transmembrane Helix	300	321	0.95
Cytoplasmic	322	327	0.90