YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57237009, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.87
Topology Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFFYYFLTW TAFLFCAVFI LLLSFLKSKY KTSLKSRFFL YKNLHQEKAD VHFHACSYGE  60
   61 VRSIKTLVLK FDSRITTITQ TGFECAKEFC KKVNYLAFEN FLPFWFKPCK VLVIFEAEYW 120
  121 LMLVFMARIY KAKIILLNAR ISDKSYHSYQ RFSFFYKKIF SYIDEVFAQS DLDKARLESL 180
  181 GAKNVKIFKN IKANLEIKNN KIYAKPKEKL IIFASTHKDE EELLLDYFKL EENEKLIIAP 240
  241 RHPERFKEVE NLLLNKGLEF EKFSSLKDEN KKFAKKILLL DALGELVNFY TISDVVVLGG 300
  301 SFIEGIGGHN PIEVAYFDNV LISGKFIHNQ KALFEEVENV YFCENLKDLN DKIHYLNLKA 360
  361 KISKKGNLDL IIQTIQKGID ARKSL

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.60
Transmembrane Helix	7	26	0.84
Cytoplasmic	27	385	0.57