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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|56911104, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVFPIQKKL MLAGSSASIV ALVASALPLQ SAYASSITVK ETHYNSSFDA VVDRQMGLSA  60
   61 RPQTDKNGRW ENASRSDVAY YMNANNFKQG TSSYLQFLNL SSSAGLSAGT INSQLLSDKG 120
  121 ILQGQGQAFI NASKLYGVNE IYLISHALLE TGNGKSQLAT GVQVNGKTVY NMYGIGAYDG 180
  181 NAVSAGAQYA YNQGWFTPED AIIGGARFVS SNYFARGQNT LYKMRWNPAN PGTYQYATDV 240
  241 GWAVKQTHHM SNLYSLVDDY EMTFDVPVYK NQPTGDAGND KLEQLPTGTF GTTTARLNVR 300
  301 TGPGTSHSIV TTLDKDTKVE LLAKQGNWYQ IAVDNTTGFV SGDYLKLDKP SEDNVEDSDQ 360
  361 ELISYGETTA RLNLRSQPNT SSNVLTTLAL GQKLEILKKE GNWYRVRAGH QSGWVSADYV 420
  421 KISSNGVDKE SPSLGSATTT ARLNLRSGAG TNHSIITTLT KGQKVELLKK QGGWYQVKAG 480
  481 NRTGWVSADY LNVNGSGNVD NAPSSGSATT TARLNLRSGA GTNHSIITTL TKGQKVELLK 540
  541 KQGGWYQVKA GNRTGWVSAD YLNVNGSGNV DNAPSSGSAT TTARLNLRSG AGTNHSIITT 600
  601 LAKGQKVELL KKQGGWYQVK AGNRTGWVSV DYLNVSGSGN VDNTPSSGSA TTTARLNLRS 660
  661 GAGTNHSIIT TLAKGQKVEL LKKQGGWYQV KAGNRTGWVS VDYLNVSGSG NVDNAPSNGS 720
  721 ATTTARLNLR SGAGTNHSII TTLAKGQKVE LLKKQGGWYQ VKAGNRTGWV SVDYLNVSGS 780
  781 GNVDNAPSNG SATTTARLNL RSGAGTNHSI ITTLAKGQKV ELLKKQGGWY QVKAGNRTGW 840
  841 VSVDYLNVSG SGNVDNAPSN GSATTTARLN LRSGAGTNHS IITTLAKGQK VELLKKQGGW 900
  901 YQVKAGNRTG WVSADYLNVS NNQAKTESVE TVIDRGTTTA RLNLRVDPNT SSKIITTLNN 960
  961 GQQLDILKKQ GSWYYVKVGS QTGWVSSQYV KLTEAKPTVQ VMARTFSFAP IAPEVETNEE1020
 1021 ANESVNEEND VADLENSPSE KQQPIDEVEK EEDKQDVSPD KERDTDEHAE EPSIDENDTV1080
 1081 PHSDEANDQT VEEDDHVADE NEQASETTDT ENDAENEESN LPASEEAPSE ENDSTDESSL1140
 1141 EEPQEPETDP STDEQEPETD ASADEQEPET DANTDEQEPE TDASTDEQEP ETDASADEQE1200
 1201 PKTDASTDEQ EPETDASTDE QEPETDASAD EQEPETDANT DEQEPETDAS ADEQDLAEQV1260
 1261 AEEEHGDADG TSEDQESPVS DTAENNEADE NSEPVQEEET DVADDEAEAL PEEAEGPSEQ1320
 1321 DEEPSEATEE QQTTVGQKIQ LTENTLLFSE ASSDSEQLLE LFEDDTIEIL EEGTDFVKVK1380
 1381 ANGVEGWIAV EALAAVLP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle