YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FENR2_BACSK
Protein type:	Transmembrane
Type Confidence:	0.78
Topology Confidence:	0.42
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQEQKDMFDL TIIGGGPAGL FAAFYAGMRK MKVKVIESMP QLGGQLSALY PDKYIYDVAG  60
   61 FPKVKAQDLV DQLTAQAQQF QPEIVLEEAV QTLEKQEDET FVLTTDANIH YTKAVLITAG 120
  121 AGAFAPRKLQ VEKADFYEDK NIHYFIRDLS AFTGKRVVVI GGGDSAVDWA LMLEPIAKEV 180
  181 TLVHRRDAFR AHEHSVDLLK KSSVRILTPY ETAELHGDEN GVTAVTFSEV KGDQTETIAV 240
  241 DDVIVNFGFV STLGPIKEWG LEIRKNAIPV NTKMETNIPG VYAAGDVSTY DGKIKLIATG 300
  301 FGEAPTAVNN AKVYIDPTAR AFPGHSTSLF

Type	Start	End	Confidence
Cytoplasmic	1	6	0.42
Transmembrane Helix	7	28	0.71
Non-Cytoplasmic	29	330	0.66