YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56910672, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAENREYFNR RLHSLLGVIP IGIFLIQHLI VNHFATRGPE AFNQAAHFME SLPFRYALEL  60
   61 LIIFIPILYH AIYGIYIAMQ AKNNTSRFGT FRNWMFRIQR WTGVFLLIFI SWHVWDTRIQ 120
  121 ALFGHEVNYD MMANILQNPW MMAFYIVGIV SATFHFANGL WSFAVSWGIT VTPRSQQIMT 180
  181 YVSIIVFAAL TYVGVSAAFA FV

Type	Start	End	Confidence
Cytoplasmic	1	11	0.95
Transmembrane Helix	12	31	0.94
Non-Cytoplasmic	32	55	0.89
Transmembrane Helix	56	77	0.94
Cytoplasmic	78	97	0.90
Transmembrane Helix	98	115	0.96
Non-Cytoplasmic	116	140	0.93
Transmembrane Helix	141	165	0.86
Cytoplasmic	166	177	0.88
Transmembrane Helix	178	201	0.91
Non-Cytoplasmic	202	202	0.99