YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56963635, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRTKRIARC LLGATLAFAV LFFNNEMVDA FSDQVIQKGA TGDDVVELQS RLQYVGYYNG  60
   61 KIDGVFGWGT YWAVRHYQYE YGLEIDGLVG DDMKAKLAST TDYDKAFVTK ALNEGRKFSH 120
  121 YGGTPKDIQK GPKGSADKQK QKKEAAKGGE AQQPAPNQPE TGNEQEPIIE KANNVPSGYS 180
  181 SNDIQLMAQA VYGEARGEPY EGQVAVAAVI VNRLNSATFP DTVAGVIYED RAFTAVADGQ 240
  241 INLGADETSR QAVLDALNGQ DPTNNALYYF NPDTATSDWI WSRPQIKRIG KHIFCY

Type	Start	End	Confidence
Signal Peptide	1	30	0.96
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	296	0.99