YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56963396, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFQLIINTL VAFLWMLFQN SFTAQTFVFG YVIGMLVVLC LIRFKGRYFY MLRVWSFLKL  60
   61 MGVFAKELTV ANLDVAKIVI SPKMNIAPGI IAVPTELETR VEKTLFAVMM TLTPGTMSIE 120
  121 FSEDGRYIFV HALNAEDKDG LVKQAKDTFE AGILEVTRRY HV

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.81
Transmembrane Helix	21	44	0.85
Cytoplasmic	45	162	0.88