YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56963023, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKVFGSSL VAVTALVLAA CGGNDTNSGN GGDSEDGYSP TDVLKVQFVP SQNAENLDVI  60
   61 AAPLEELLSE RLDIDVEVSV STDYPSVVTA MGSKTIDVGF LPPNAYVTAN EEGYADVLLQ 120
  121 SLRYGVNEED GSQTDELVNS YKSQFVVMAD SDIESLEDLE GKTIAFQGAT SSAGYVWPAA 180
  181 SLLDAGIDPQ NDVKGVEFQG HDAALIALLN GEVDAAVTFQ DARNTIKEEF PDVWEQTRVV 240
  241 ALTEDIPNDT VSVRSDLSQE WRDKIADAFI EIGEDPEGRQ IIFDIYSHEG YELSEDSNFD 300
  301 IVRDYAERIQ QP

Type	Start	End	Confidence
Signal Peptide	1	22	0.94
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	312	0.99