YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|56962545, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKWMNGLLA GAAVLALSAC GGGDETVDGS TENSNEESTL AKIEEADKFV VGVKFDTRLF  60
   61 GLKDPGTGEV EGFDIDIAKE IAKELLGDEN KIELKEVTSK TRIPLLDNGQ IDAIIATMTI 120
  121 TEERKKEVNF SDVYFEAGQS LLVEKGSDIQ GIDDIGAGTK VLAVKGATSG QNLLEQAPDA 180
  181 EVIELENYQE AFLALQSGQG DALTTDNSIL YGMAEENSDY EVVGGTFTDE PYGIAVRKGD 240
  241 DEFTEKINEI LADLKASGRY DEIYEKWIGE SPE

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	273	0.99