YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78369372, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFLNMLRS WLVMVSIVAA GNSLQSFRDH TFLYEKLYTG KPDLVNGLQA RTYGIWTLLS  60
   61 SVVRCLCAID IHNKTLYYIT LWTFFLALGH FLCELFVFGT AAPTIGVMAP LMVASISILG 120
  121 MLVGLRHLEA EPGSRQKKRN

Type	Start	End	Confidence
Cytoplasmic	1	6	0.90
Transmembrane Helix	7	27	0.82
Non-Cytoplasmic	28	49	0.88
Transmembrane Helix	50	68	0.89
Cytoplasmic	69	77	0.76
Transmembrane Helix	78	98	0.92
Non-Cytoplasmic	99	105	0.69
Transmembrane Helix	106	128	0.89
Cytoplasmic	129	140	0.97