YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	C1QBP_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQLLRCVPR VLGTAVAGLR AAAPSLPRLQ PASRPCARPF GLLSVRARSV QLPGLLKPRG  60
   61 PCACGCGCSG LHTEGDKAFV DFLSDEIKEE KKIQKYKSLP KMSGGWELEV NGTEAKLVRK 120
  121 VAGEKITVTF NINNSIPPAF GGEEEEPSQG QKAEEQEPEL TSTPNFVVEV TKDGSSKALV 180
  181 LDCHYPEDEI GQEDDQSDIF SIKEVSFQAT GESDWKDTNY TLNTDSLDWG LYDHLMDFLA 240
  241 DRGVDNTFAD ELVELSTALE HQEYISFLED LKGFVKSK

Type	Start	End	Confidence
Signal Peptide	1	24	0.86
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	278	0.99