YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|93357742, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSRSRVLS TFSTATFITV LFAATVSSAH AAEPQAEPIQ PIAPAKVQHP ERVALGEKLW  60
   61 FDPRLSRSGF ISCNSCHNLS MGGSDNLKTS IGDKWKQGGI NSPTVLNSSL NFVQFWDGRA 120
  121 KDLPEQARGP IANPIEMAFT HELAVDTLRS IPGYVDEFRK VFKSVKLTIS EITLAIAAFE 180
  181 ETLVTPNARF DKWLKGDKTA INAQELRGYQ LFKGSGCVAC HNGQNIGGNS FQKMGLVEPY 240
  241 KTGNPSEGRA AVTGKDADRF NFKVPTLRNV ALTYPYFHDG EAATLSQAVD TMGRLQLARK 300
  301 FTPEENADIV AFLKTLTGDQ PKIVLPMLPP SSDKTPKSKP FE

Type	Start	End	Confidence
Signal Peptide	1	31	0.99
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	342	0.99