YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68559799, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.58
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTPAVSRP VRYRKVLVLH GPNLNLLGTR EPQTYGHTTL DDINEALAKR AAEAGIELDT  60
   61 FQSNHEGALV DRIQAARGEG VDFIIINPAA YTHTSVAMRD ALAGVAIPFV EVHLSNVHRR 120
  121 EPFRHHSYFS DQAIGVICGL GWQGYLLALD YALAQEQTAS SG

Type	Start	End	Confidence
Cytoplasmic	1	127	0.53
Transmembrane Helix	128	146	0.52
Non-Cytoplasmic	147	162	0.85