YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SGMR1_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCWAVGRRWA WAALLLAVAA VLAQVVWLWL GTQSFVFQHE EIAQLARQYA GLDHELAFSR  60
   61 LIVELRRLHP GHVLPDEDLQ WVFVNAGGWM GAMCLLHASL SEYVLLFGTA LGSSGHSGRY 120
  121 WAEISDTIIS GTFHQWREGT TKSEVFYPGE TVVHGPGEAT AVEWGPNTWM VEYGRGVIPS 180
  181 TLGFALADTV FSTQDFLTLF YTLRAYARGL RLELTTYLFG QDA

Type	Start	End	Confidence
Signal Peptide	1	23	0.56
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	223	0.73