YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|57238289, gi|...
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKILKYIFSF FTLLFIAGFI YVAYLFTSAD TEGYTFKEYK PPLTTQIYDR NGKLVANIFE  60
   61 QHRFYAPYEE LPPRLIEALV AIEDTSFFEH NGVNIDAIFR AAVKIIKSGG KTMEGASTLT 120
  121 QQFIKNTELT PERTITRKIR EALLAYKMET ILTKEQILER YLNFIFFGHG YYGVKTAALG 180
  181 YFHKNLNELS LKEIAMLVGM PKAPSSYDPT KHLDLSISRA NNVISRMYNL GWISKADYDT 240
  241 AIKEIPQVYD DTLTQNAAPY VVDEVIKQLS PNIKDLKTGG YKIILNIDLD VQNMAQNALK 300
  301 FGYDEIVKRD KDANLSTLNG AMVVVNHQSG DVLALVGGVD YEKSNYNRAT QSMRQPGSSF 360
  361 KPFVYQVAIN LGYSPMSEIA DISRIFEGGA GNNEDWKPKN EGGKFLGLIT LKEALTRSRN 420
  421 LATINLALDM GLDVLYSKLM EFGFKDIPPN LSIVLGSFGI SPLEYSKFYT MFGNYGTIKD 480
  481 PQIIRQVQDK TGKTIMEFNS NERKVSDEAQ SFLVLDMMRN VVEKGTGRNA RVKDIEIAGK 540
  541 TGTTNKSVDA WFCGLTPEIE AIIWYGNDNN KPMRYTEGGA RTAAPVFREF LTQYIEKFPD 600
  601 TTRKFSIPNG VYRGNYKGES AYYTTKSPLP KANMKFNESE IIF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle