YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68168096, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSRKYLIVI FLMCTPLILN ITGCWNQREL NSLAIVMGLG IDKAQEPNQI QVTAQIANPK  60
   61 ALKSSSLGGP DSQAFWNIQN TGDTLFSILR DFTHESNRKL YFPHIQVLIL GRDYAEEGIQ 120
  121 KELDFFARDH ETRLNIWLVV SEGNARDVLN IKPVIDRIPA INISKLLDDQ DPNSQTSTSQ 180
  181 LNDFLSDLIS PTTAPTAPLV EIIRKGGNES LQVKGTAVFK GDKLVGELNK YETRGLLWAR 240
  241 DEVKSGIIDV ECPECGSKVS LEIIDSKTKV SAEIVDNQVI MKVYIQEKGA LAAQYCAENL 300
  301 RTKEKVAAIE RNKAAAIQDE VLAAFKKAQE LNADIFGFGE VVRKKHLKEW KNMQEHWDEI 360
  361 FPEIIVEVTV DASIERSGRI HYPPVTDKE

Type	Start	End	Confidence
Signal Peptide	1	24	0.80
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	389	0.99