YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57167396, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHIDASHPY FGIFLMLVLA SVIFFGLVFL ASKIGNNFAA KNRKKLGLGI YECGPIPVKQ  60
   61 ANKINSQFFI IALIFILLDI EVVFLFPWAL IFKDLGWFGL LEVFVFIVLL GVGFLYAYKK 120
  121 GAFAWQSIK

Type	Start	End	Confidence
Non-Cytoplasmic	1	9	0.88
Transmembrane Helix	10	34	0.86
Cytoplasmic	35	67	0.91
Transmembrane Helix	68	90	0.93
Non-Cytoplasmic	91	97	0.73
Transmembrane Helix	98	118	0.96
Cytoplasmic	119	129	0.91