YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57166719, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCINCGAFA LLCFCELCEL ELSEFSLNVR KLDNNFKVYS FYKYHEIQHL LHSKHYFYGY  60
   61 FVYKMLAKLS FAKFKDFFDP RMTINVIALD DKVEDMLYSH SAILARYLKT KFVKPVFNVL 120
  121 KAQNHIKYSG KSLEFRQKHK RNYKLLKTIH EPVILVDDIV TTGSSLLEAK KVLEENKISV 180
  181 LFALVLADAK V

Type	Start	End	Confidence
Signal Peptide	1	20	0.87
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	191	0.99