YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57165891, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKIIVFILC CFMTFFLYAC SSKFENVNPL GRSFGEFEDT DPLKLGLEPT FPTNQEIPSL  60
   61 ISGADLVPIT PITPPLTRTS NSANNNAVNG INPRFKDEAF NDVLIFENRP AVSDFLTILG 120
  121 PSGAALTVWA LAQGNWIWGY TLIDSKGFGD ARVWQLLLYP NDFAMIKNAK TNTCLNAYGN 180
  181 GIVHYPCDAS NHAQMWKLIP MSNTAVQIKN LGNGKCIQAP ITNLYGDFHK VFKIFTVECA 240
  241 KKDNFDQQWF LTTPPFTAKP LYRQGEVR

Type	Start	End	Confidence
Signal Peptide	1	22	0.97
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	268	0.97