YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57237413, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKALLIAS LVAFSSLNAA SLIDEAKNSG LVALPKDQKG VDEILKQNGV KASEFTLEKA  60
   61 ELGKKLYFEP RLSKSGIISC NTCHNVGLGG TDGVSTAIGH KWTANPHHLN SPTVYNAVLN 120
  121 NTQFWDGRAG TLADQAKGPI QADPEMATPA KLAVEKISSL PEYVSEFKKI YGKSGVNFDN 180
  181 IADAIANFER TLITPSRFDK FLEGDEKALT KEEQKGLKLF IDKGCVACHN GVNLGGNMQA 240
  241 FEVAGKYKFA NLGDFKGDAN GMVKTPTLRN VAETAPYFHN GAIWNLKDAI KEMGSVQLGI 300
  301 KISDKEAKSI ETFLKSLTGT KPAIVYPQLP ISTEKTPKPE L

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	341	0.99