YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125972987, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARGGSTKSE LSGKEKAAML LIALGPERSA EIFKHLKEDE IEQLTLEIAN IRTVSPEDKE  60
   61 RVLEEFYQIC LAQNYIAEGG INYAKEILEK ALGTQKALDV LNKLTVSLQV RPFDFVRKAD 120
  121 PSQLINFIQN EHPQTIALIL SYLKPQQASI VLSALPQDKQ ADVARRIATM DRTSPEVIKE 180
  181 VERVLEKKLS AIVTEDFTAA GGVQAIVDIL NNVDRGTEKY IMETLEVEDT DLAEEIKKRM 240
  241 FVFEDILTLD NRSIQRFLRE VDNNQLAIAL KGTNDEVKNK IFANMSKRMA EMVKEDMEFM 300
  301 GPVRLKDVEE AQQKIVNVIR KLEDAGEIVI SRGGGDDIVV

Type	Start	End	Confidence
Signal Peptide	1	30	0.81
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	340	0.99