YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67086603, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALRHRCRRV PAGTIGRDEL RCIRFHLSCV AGYSVSLKLW APRIQLYLSW LTQADFHRGH  60
   61 PSAPRPPVPK SSSRLVINGD DHRALPLSAT QGGYAMNNVI SKQGPSQGTT EARTESENAE 120
  121 VALKNIVDGF HRFRTEVFPQ QKEFYRSLAS AQRPRAMFIT CADSRIVPEL ITQSAPGDLF 180
  181 VSRNVGNVVP PYGQINGGVS TAIEYAVAAL GVHHIVVCGH SDCGAMKAVL DPPTLESMPT 240
  241 VKAWLRHAEV AKTVVLENRC SCNGRDTLEV LTEENVVAQL DHLRTHPSVA ARLASGQLFI 300
  301 HGWVYSIETA EIKAYDAEQG CFRPLDSEGS IPVATPRPRF HQG

Type	Start	End	Confidence
Cytoplasmic	1	20	0.61
Transmembrane Helix	21	41	0.61
Non-Cytoplasmic	42	343	0.99