YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|67154143, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSRAALSIR LLLLGGLALL VSCSSTSPER GAASSGAKPS QPRPLKDGAP WWDVDVSKIP  60
   61 DAVPTPHYGP VKANPYTVLG KTYYPMNDGR RYKATGTASW YGTKFHGQAT ANGELYDLYG 120
  121 MSAAHKTLPL PSYVRVTNLD NQKSVILRVN DRGPFYSERI IDLSFAAAKK LGYAETGTAR 180
  181 VSVEGIDPEE WLAQQGRKPP LAPTRPPLAE ARPAAQPIEE YSPPPTQHAA PVLPVAVAAG 240
  241 PAVAAPDAGL YLQVGAFANP DAAELLKDKL SRISSTPVFV SPVVRDRQTF HRVRLGPIGS 300
  301 QDEARRLQDS VRLARLGQPT LVRPD

Type	Start	End	Confidence
Signal Peptide	1	28	0.97
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	325	0.99