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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|67153890, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVRFSVRFR SLQAVRVARR RTTLIRKPCF GPAASALLGL FPFSPLLAAD EPLALDDLVV  60
   61 TAARSAQSLR DSLAAVSLIE RDDIERSQAQ SVPELLKKVP GVSIANNGGP GKSTSVYLRG 120
  121 TESDHVLVLI DGVRVGSVTS GTAAWQDLPV EMIERIEVVR GPRSSLYGSE AIGGVIQIFT 180
  181 RKGGDGAPRP FFSAGYGTHD SYTGSLGVSG GNAHGWYSLA LSSADSDGIN VKRPGASGYE 240
  241 SDADGYRNHS ASLRAGWRFD NGLELEGSFL RAKSHNDYDQ VNSRRTSGFS ANADGEQNVV 300
  301 SGRARFSPLA FWQVTLQAGR NEDKSDTYQD GHFYSRFDSR RDSASWQNDL TLAEGHILTL 360
  361 GVDYQREEVN GSTDYDEDSR ENNGAFIQYL GEYGRHDWQV SLRRDNNEQF GQHETGNIAY 420
  421 GYALTDALRA TISYGSAFKA PTFNELYYPF YGIADLEEET SHSLEVGLSG SHAWGHWSLN 480
  481 AYRTKVNDLI VYDSSIQGPA NLDEARIRGL ELEVGSRTFG WDWSANYSLL EPENSGSGTN 540
  541 DGNELPRRAA QMFNLELDRR FGDFAVGATL HAEGRRYDDV ANDDELSGYA TVDLRGEYRI 600
  601 SPEWRLQARV ANLLDADYQT AWTTTSRGRR CTLPSAIRRC EAPPAGGPEP YKEKAHAQSV 660
  661 LPQPTDRRCA AGPADGRDPW SSLRHSRSAE RLLGGVLPRR RPAAPALGVP GAVPGSLAAR 720
  721 LRRHRLDGRE RLVPVAGLLA AGAGLRLAVA GRTPLCPPAT RQPGRARPGG GLRRFRLLPV 780
  781 LRRRFLLLLR PLRGADLRRL RAAPDRLLPA QPGRPGPLRG PRRAALRGLR HPPEDAAGAG 840
  841 RARMSESPER DARHKARMQR KKAVVDARIA RAGDEHGLLL VHTGNGKGKS SAAFGMAARA 900
  901 LGHGMRVGVV QFVKGAASTG EEAFFRRFPE QVCYHVMGEG FTWEIQDRQR DIDRAREAWK 960
  961 VARELLGDPS IGLVLLDELN IALKYGYLEL EPVLADIRAR PWHQHVVATG RGAPPGLIEA1020
 1021 ADTVTEMSPV KHAFQAGVKA QKGIEF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle