YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|226945848, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQMRKLGSSG LEVSALGLGC MGLSHGYGPA TDTGQAVSLI RAAVERGVTF FDTAEVYGPY  60
   61 LNEEVVGEAL APVRERVVIA TKFGFTFGDD NKQQILDSRP EHIRWAVEGS LKRLRTDHID 120
  121 LLYQHRVDPE VPIEDVAGMV KELIAEGKVK HFGLSEAGAQ TIRRAHAVQP VTALQSEYSL 180
  181 WWREPEQEIL PTLEELGIGF VPFSPLGKGF LTGAIGASTT FGSDDFRSTV PRFSPQALQA 240
  241 NQALVESLGR IASDKGVTPA QVALAWLLAQ KPWIVPTPGT TKLHRLEENL GAASIELTEA 300
  301 DLGKIATALK QVKIQGDRYP AALQARVGR

Type	Start	End	Confidence
Signal Peptide	1	26	0.82
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	329	0.99