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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|226946281, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRTRSPKSP PPRRSAVLRS WLGWSAKLAL VGLVVLAGFA VYFDAVIQEK FSGKRWTLPA  60
   61 KVYARPLELF SGLKLSKQDF LTELDALGYR REAVAGPGSA FVSGNTVELH SRGFRFYEGD 120
  121 EPARRIRVRF SGDSVASLSD AAGKDLAVVR MEPPLIGGLY PSHNEDRILV QRNELPPYLV 180
  181 ETLVAVEDRE FFSHFGVSPK SIARALWVNA TAGGVVQGGS TLTQQLVKNF YLNNERSLVR 240
  241 KATEAMMAVL LELHYDKDEI LEAYLNEVFL GQDGNRAVHG FGLASQYFFG QPLAELQPHQ 300
  301 IALLVGMVKG PTYYNPRRNP ERALVRRNLV IDLMVGQGVI DAAQAEAAKQ KPLGVTARGS 360
  361 MADSSYPAFL DLVKRQLRED YQEADLTEEG LRIFTSLDPI LQSKAEAAVR NTFKRIGKGG 420
  421 DPVEASMVVS NPETGEVLAL LGSRQPRFAG FNRALDAVRP IGSLIKPAVY LTALERPNQY 480
  481 TLTSWLADVP FSVKGQDGQL WRPQNYDHRA HGDIYLYQGL ANSYNLSTAK LGLELGVPNV 540
  541 LKTLARLGVN REWPAYPSML LGAGALTPME VSSMYLTIAS GGFNTPLRGI RSVLTADGEP 600
  601 LKRYPFQIQQ RFDPGAIYLL QNAMQRVMRE GTGRSVYSQL PRSLTLAGKT GTTNDSRDSW 660
  661 FAGFSQDLLA VVWLGRDDNG KTPLTGATGA LRVWTDFMAK ADPLPLDMPM PDNVTLAWVN 720
  721 ARNGLGSEQG CPDAVQMPYI RGSEPPPGPA CGLPQAPEGN VQDVIENVQD VMDWVRGWSN 780
  781 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle