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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|116612289, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTGRPAGG APGGTAAVER IPRPRGGPGH GGPFAGMNVP AEKAMNFWPS AKRLLGTLRP  60
   61 ERLWLVLVIV LSVAAVALSV IGPRLLGEGT NLIFAGVVSK QLPAGVSKAQ LIAQLRAAGE 120
  121 NQKADMLSAM ALTPGQGIDF TALANVLLWA LVLYVLASAF MWIQAYILNG VVQRTVYRLR 180
  181 ERIEAKINRL PLRYFDSIQR GELLSRVTND VDNISQSLQQ SISQAVTSLL TVLGVLVMMF 240
  241 LLSPTLALIA LVTIPLTLVT TTMIAKRSQK LFVAQWKHTG ELNGQIEETY TGHALVKVFG 300
  301 RQQEVGERFR QKNAELYEAS FGAQFISGLI MPAMTFIGNL VYVGIAVVGG LQVASGAMQL 360
  361 GDVQAFIQYS RQFTQPLAQL GSMANLLQSG VASAERVFEL LDEEEQSPEA AGSAPDGGQG 420
  421 RLVFENVSFS YTPDKPLISD LSLVAEPGQT VAIVGPTGAG KTTLVNLMMR FYEIDAGRIT 480
  481 LDGVDITSVS RRELRSRMGM VLQDTWLFGG TIRDNIAYGR PDAPEEEILE AATATYVDRF 540
  541 VHSLPEGYDT VLEDEGGNVS AGEKQLLTIA RAFLARPSVL ILDEATSSVD TRTEVLVQKA 600
  601 MSALRSDRTS FVIAHRLSTI RDADLILVME AGQIVEQGTH ASLLAAGGAY ARLYEAQFAA 660
  661 PVAEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle