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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159129606
Protein type: Transmembrane
Type Confidence: 0.71
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSAETTPLL PQYHQQPASS NTSQQRGSRP SRTVTFNPLA TVSTYHDATA AADSTYKPLS  60
   61 SGASSVPNAP SSQSRPTGLS ALNSKLRRRN SHGAPYSTAG PSMPPAPKVG PQRTTKNAQK 120
  121 LKLLPDPVTA TEEDITDDEF PRDVYSQITR IKEPTARSHA ARLGKADRDR LPRVTAYCTA 180
  181 NSYRLEGVIK FLKARSKTRG ANPKLYDECV YSPYDYLFED KQRVSRTVSD NALGLHPVSS 240
  241 SHDRPSGERR YSDSAVEVED NAKSRREDLI DLRESQDQSH HDAHPENSVA VQRTDETPDF 300
  301 DTTIHTPEVF LFDYGTVVIW GMSPAQESRF LSDVSKFANS ILSPEDTQVE NFNFYYAREY 360
  361 QARIYNDFIS LRDPRNHMIK LAISHALSQS VKTSLFEDLV SETISNTAPL PAQIAQTGSV 420
  421 NMTRRQINMQ IGELFILRIN IHLQGSVLDS PELMWAEPQL EPVYQAVRSY LEMDQRVSLL 480
  481 TERLDVIADL LAVLKDQLTH RHGEYLEWIV IILIAAEILV AAINIVVDLY AGVD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle