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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71001558, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWRLVGSLL AFFAATSIAW PYDEALVDYN LNTNKQASNP AEYSTDGPGH KYTPSPDNWR  60
   61 FPMYTLFLDR FVNGDPTNDN INGTLFEHDL NSNQMRHGGD VVGLIDTLDY LQGMGIKGIY 120
  121 LAGTILLNQP WGSDGYSTLD TTLLDHHFGN IQSWRDAISE IHRRGMYVVF DNTIATMGDL 180
  181 IGFEGYLNTT TPFSVKEHKA LWKTDRHYVD FHFGNDYNET CDYPRFWNET GWPVDQSVRD 240
  241 QLNGCYDSDF DQYGDREAFG VYPDWQRQLA KFASVQDRLR EWNPSVRQRL TRHSCMIIEA 300
  301 LDIDGFRYDK ATQATVDALG EMSLAYRECA RKVGKNNFFI SGEITGGNTF GSIYLGRGRQ 360
  361 PNQYLKSAID AMNMTNLSDH QYFLREHGHE AIDAAAFHYS IYRSLTRFLG LDGNLAAGYD 420
  421 TPVDWTDAWN LMVISNDMIN ANTGKFDPRH MYGATNQDVF RWPAIEYGVE RQLLALFITT 480
  481 LHLPGIPLLL WGEEQAFYIL DATASNYIYG RQAMSPATAW KTHGCFQLTP SQYYNWPIQK 540
  541 GRQGCHDETA TYDHRDPSHP VRNIIKHMYQ MRENYLVLND GWWLQKLSKQ TREIYLPGSN 600
  601 STPTETGMWS ILRGVTPGIQ SLGSDKDDQP VWLVYQNENH TVDYKFDCGS NDSALVAPFA 660
  661 SGTTVRNLFY PHDEHVLKDG PKKLGLNGSS DTNGCLDSLT LKPFEFRAYV PKNRFIAPRP 720
  721 MITQITPGHD TPLLSKVAPD QAEEIDVSIY FSAEMDCDSV TKSITLNSTT ESGKTPSVDS 780
  781 KSASCRKIPA TDTQWTGQLP NVWVWTGKLT GVYNGIHRLT VTNASDSAGT SATNAIDHFL 840
  841 FRVGQSDNPM VFTSANYSSS LLHEHENGTL FIQHHAAGAD KYRYSTNWGS SFSDWMDYKG 900
  901 GNETIEELPW SGTEKQKWQG KHVRVEYWSK LTGSSDYVQE GDSGWDSNRP RRFPHLFFNG 960
  961 PYNQYGYDAG LDNAVQLGDD GLWRFRFVAE WPAQGQFNVW GINPDGQPDQ SFVFGDADMD1020
 1021 GVLDRMPPSS LSTTLINITD HPPAPHLAWV LHLDDSTLQF QLEPTGSRAA QMAAFFLLWL1080
 1081 IPVLTAAACV YGFKKSFYQV KFNQVGVSEK KKLLPLWLRR KIKRADLEDG EPMNPLVRFA1140
 1141 NRSSFVQSRS AFNEGTLKRR TVLIATMEYD IEDWAIKIKI GGLGVMAQLM GKNLGHQNLI1200
 1201 WVVPCVGGVD YPEDQRADPM FVTVLGNSYE VNVQYHVIKN ITYVLLDAPV FRQQTKTEPY1260
 1261 PARMDDLDSA IYYSAWNQCI AQAIRRFSVE LYHVNDYHGS IAPLYLLPQT IPICLSLHNA1320
 1321 EFQGLWPMRT QKEKDEVCSV FNLDLDVASR YVQFGEVFNM LHAGASYLRL HQQGFGAVGV1380
 1381 SKKYGKRSYA RYPIFWGLKK VGNLPNPDPT DTGEWNGEPT RQSDIKVDAA YEASRGEFKR1440
 1441 QAQEWAGLEQ NPNADLLVFV GRWSMQKGID LIADVMPAVL EARSNVQLIC VGPVIDLYGK1500
 1501 FAALKLDRMM ELYPGRVFSR PEFTALPPFI FSGADFALIP SRDEPFGLVA VEFGRKGALG1560
 1561 IGARVGGLGQ MPGWWYNVES TTTSHLLHQF KLAIGSALDS KPKVRAIMRA RSAKQRFPVA1620
 1621 QWVEDLEILQ STAIRIHSKE LAKSSGQTLT PSGCNTPSGT MTPPVAGNLT PTGIQTPPLM1680
 1681 HSREPSVSNA SRLSVLGPQQ RNTIVYSRDP SPGMIEKPKS GLSRQLSLGV RAGPGHLERR1740
 1741 GRRKLKKMNQ AGSDDNQNST TDVESSSDDD IIPSYYGDDE YTLTPEQAEA GRQTEISQQQ1800
 1801 GHHSVWTPRD FFSQRHSSQT SISFNTPLSP TSTGVTEADD AIFPPARRML EPANPSHRLS1860
 1861 SASVLSVDSI VGAKRDYRLQ RVDPFFTDST GEFYRIFEKK LETLNGSNSE SQLCIEEYLV1920
 1921 KSEKKWFNRF RDARLGRNQS PASSVFRIKR DYSPNDTVSN EMGARESDSD PPKERDEFFL1980
 1981 GSDYVPPTGL KKWMQVRIGD WPIYSIFLGL GQIIAANSYQ ITLLTGEVGQ TPEKLYGIAT2040
 2041 TYLITSIIWW FFFRYFKSVV VLSLPWLLYG LAFVIIGVAH FESNSFSRGW IQNVGSGLYA2100
 2101 AAASSGSIFF ALNFGDENGV PVKQWVFRAC VIQGTQQAYV IGLWYWGTSL AQASNSGIIN2160
 2161 PQGDITNTWR ITAICLPIAI ILWSVGLLVF FGLPNYYRQI PGKVPSFYKS VFRRKIVLWN2220
 2221 FVVVIVQNFF LSAQYGRNWS FLWSSKNAEA WQVGILCAFF FGAVWAALLY LFGYLSKSHS2280
 2281 WIIPVFACGL GAPRWAQVLW GVSGIGLYVP WAGGDLAGAL VSRSLWLWLG VLDSLQGLGF2340
 2341 GMILLQTLTR MHICFTLLAS QVLGSIATIC ARAFAPNNIG PGPISPDLTA GVSSVANAWF2400
 2401 WIAIFFQLLI CAGFLRFFRK EQLSKP

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