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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66852876, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKEYYWYYI AYEDLKKALK TGYVSEPTSE NPKPDRKPWT EDHEKRFVSL LESELDKVFN  60
   61 FQKLKSEEIV RRIQASEKDV ADVVSRLDNA NNSRRQSLRT SQPPPSDEDF LLLEQVLSDI 120
  121 IADVHDLAKF TQLNYTGFQK IIKKHDKQTG WHLKPVFAAR LKAKPFFKDN YDAFVVKLSK 180
  181 LYDLVRTKGN PVKGDSAAGG SQQNFVRQTT KYWVHPDNIT ELKLIILKHL PVLVFNPNKE 240
  241 FEEKDAAISS IYFDNTNTWE LYEGRLKKTE GAEAIRLRWY GGMESDQIFV ERKTHREDWT 300
  301 GEKSVKARFS LKEKHVNAYL SGRMTVESIF EKMRKEGKKS EQEIADLEQL AREIQYRVIT 360
  361 RRLEPVTRTF YHRTAFQLPG DARVRISLDT ELTMIREDNL DGRQRSGNNW RRMDIGVDWP 420
  421 FSQLPPQDVE RFPYAVLEVK LQTQAGQEPP KWIRELTASH LVEAVPKFSK FIHGTATLFP 480
  481 DRIHLLPFWM PQMDVDIRKP ATRRFGITRP LASTSLSANE TPEDDESDED ESDEAQARTR 540
  541 AATRDAQHSV VDQSDLFEDN DGNALDIEER IAAQPLPGDE DYPLYDSDEE SNYSDELEEA 600
  601 RRIGGGYYYQ KLVEYYIHRM GHALINGLKA IAPGPRPTDM PEPEQNGITV MGNKRTIKRF 660
  661 VAPKGKRIHV PVRVEPKVYF AAERTFLSWL EFSILLGTIA ATLLNFGNDY ITFVSSWAFT 720
  721 ILAAVALIYS LMLYIWRVDK IRKRRDVKRV YYEKWGPTVV GLGLVVIMLV NFGLRVRQTG 780
  781 FAARDGDQGF GHGRGSAGGE L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle