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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71000884, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEISHSLVAH ATTLAVRSGA SSSTSERPPA YKAVGIALAV SSGVFIGTSF VLKKTGLLKA  60
   61 NVKYNEEAGE GYGYLKNVWW WSGMILMIVG EICNFVAYAF VDAILVTPLG ALSVVITTIL 120
  121 SAIFLKERLS FVGKVGCFSC IIGSVVIALN APEQSSVGDI QDMKHYVIAP GFLAYAGVII 180
  181 VGCAIVALWL GPRYGKKSMF VYISICSLIG GLSVAATQGL GAAILAQING KSQFKEWFLY 240
  241 VLLVFVIATL LTEIIYLNKA LNLFNAALVT PTYYVFFTSS TIVSSAVLFR GFKGTGMQIA 300
  301 TVILGFLQIC AGVVLLQLSK SAKDVPDAAI FKGDLDQIRE VAAQEEPETE PKADSIRGAA 360
  361 AIIRRISTAR RRMEEEEVRR YIRDRQEDYL KPPAENEIIE WDGLRRRKTV LGQGPTMARP 420
  421 RTPGQSHTPL AGSESPGQVD HPDRRPSTRQ SDRSFLDDLR SRASSIMHPG QWHQVYNPPD 480
  481 GPADPVHLTV SPVHGNTNPD TSYHGAGIRE VSGQTDTSRS VAWADETQDH DASPHTAKRQ 540
  541 FSFNTVFNRI RSKSESEPPK PPPHSPRSIL RRSHLVPGAE RHALKGATEE ERLGLVKGDS 600
  601 RVAGEDWDMH EKLERVDSSG ESISDAPEPY GSVGYGGHGA YDYGYAAQTS PTEMQSGWQL 660
  661 PSSRSVTAAA DPGAVQSSSR PRPNPLPPLP DEEPFIAGEA SHMRVELQSP TSPRGTDGRG 720
  721 WRRPLSEHGD SPSSTNRRAF I

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle