YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159128008
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRARTVSASG LVLSSRRTPS TSICWQCLRD DLSKQLQTHA RNYHPTRRKD ASPFGAAVSA  60
   61 AQTIFKGLPK APPGISVDPL RIVGKELKFL TKNIRQLLGS GHPTLDKVAK YYTRSEGKHM 120
  121 RPLLVLLMSQ ATALTPGKSR PNDVAPISVN DPISSPSILA DTNPDTNSLV SESAEAQYDF 180
  181 VGDENILPSQ RRLAEITELI HTASLLHDDV IDNAVSRRSS NSANLQFGNK MAVLAGDFLL 240
  241 GRASVALARL RDPEVTELLA TVIANLVEGE FMQLKNTVAD EKNPVFTDET ISYYLQKTYL 300
  301 KTASLISKSC RAAALLGGSA PEVVEAAYSY GRNLGLAFQL VDDLLDYTVS GVELGKPAGA 360
  361 DLELGLATAP LLFAWKQNPE LGPLVGRKFS QEGDVQRARE IVYNSDGIEQ TRALAQEYAD 420
  421 KAVAAIADFP DSEAKSGLIQ MCEKTMNRRK

Type	Start	End	Confidence
Signal Peptide	1	22	0.90
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	450	0.99