YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COQ4_ASPFC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVLGRRGAG LAARGATLAP LATASYLIRP FSALNRPPPK YPGHVPLTFF ERGALAVGSA  60
   61 VGSLMNPRRA DLIAALGEAT ATPYFIYRLR DAMLSDPTGR RILRDRPRIT SETLKLPYLR 120
  121 TLPENSVGRT YATWLDREGV SPDTRNSVKY IDDEECAYVM QRYRECHDFY HAVTGLPTFV 180
  181 EGELALKAFE FLNTLIPMTG LSIFAFVRLK PAERERFFSL HLPWAVRSGL ASKELINVYW 240
  241 EEILEKDVDE LRKELGIERP PDLREIRKLM RQQQKREKER LQGKS

Type	Start	End	Confidence
Signal Peptide	1	24	0.87
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	285	0.91