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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159127800
Protein type: Transmembrane
Type Confidence: 0.55
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLRRVLNDI ITSNFDCHTY SSSARLKPLR DQDYNSLRDC CAPSAILARH PEHFMPLDFG  60
   61 NVRHNEIGQA YAHQFFRPRY TGALGAASAA NLRFNERGFP THLQAIAILV SHQRGYATET 120
  121 STSTSSPSNP LPPPGFNAEQ AKKPIPKEDV SRLAADNGNT QVAPKSETPL ASENSVDVQK 180
  181 RAELEAAKKG LADDDKKVTE AKKEQKKLTI GQKIKKEVQH YWDGTKLLAT EVRISSRLAL 240
  241 KMAAGYELSR REYRQLQRTV KDLGRLIPFS MFVIIPFAEL LLPVALKLFP NLLPSTYEGQ 300
  301 KAREKKALNL SSTRQEVSTF LKNTLRESGL PVTPAAVKNE EFGEFFKKIR TTGETPSTED 360
  361 VIKVCKIFKD DLTLDNLSRP QLVAICKYMN LNSFGTDAML RYNIRHRMRQ IKRDDRAIFY 420
  421 EGVDSLSVPE LQMACASRGI RTHGISPARL REDLAMWLDL RLKQGVPSTL LVLSNAYAYA 480
  481 QGGKEAEMAS QIEALKSVLS SIPEELFHEI ELEVHNAEGA ATNKQRLEVI KEQQELIEEE 540
  541 NEQNSKHEEK GVTTPKDIED IDETEDAKFE ASNSQEKQSN EAVEAEKEGD KAEQTQSEDL 600
  601 AAKEKEEKKG GSSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle