YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|159127787
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTAALQAR LKELSIALAQ IHPLIDRLRN FTVAIGQGDE ARLELGQEIH GSLKEAEEQM  60
   61 EILKVEVDAL ETGNESGRKG VDNAKELEKE RIVSLAGRLA EEMKRTRVDF RNAQLQAKRN 120
  121 AEAAKRKERE LLFSRSQSAE RRSQLNEKLS HDDIVKNASN DVTAALRRTH QLMQAELSRS 180
  181 QFAHQTLEQS TAALSSLSES YTDLDSLLSS SRDLIGSLLR SQKSDTWYLE TAFYILVGTI 240
  241 SWLIFRRILY GPLWWLVWLP IKLIARSAFA ILGTVGITST AVQLQPSASL SQSMPHEAPT 300
  301 LGQTAAMPSA SISASWDESQ APEEQSETDR LIDQIGDTIE KNSKLGDETN IDDVSPEERQ 360
  361 RQEEIPRNPK KRMYEATEIE QDLRDEL

Type	Start	End	Confidence
Non-Cytoplasmic	1	226	0.82
Transmembrane Helix	227	245	0.94
Cytoplasmic	246	262	0.66
Transmembrane Helix	263	284	0.88
Non-Cytoplasmic	285	387	0.82