YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|70999139, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRFLSQPI FKAFTGSSHV HSPLAAFSLT PSKTSVRAGS AETRERRRHD PFLMAQSRQR  60
   61 KAANLSRQQA LAREREESLG DPVESKPTPF IEELKGLKAP TSEDAALNHF ISPEGLQEAL 120
  121 EYSKSLTSPL ENPDRETADP QLEKEAAERH LQEHRNAQEA IRRIININNG NTKDRTRLLI 180
  181 QKCIDTFGRH NTDKILPPKP TAVAQDSSTV HPKKTPRIGP DTGSPEVQVA ILTAKIINLS 240
  241 RHLQSTNKDK HNKRNLRLLV HKRQKLLRYL RRKERGGPRW QHLIETLGLS DAAWKGEISM 300
  301

Type	Start	End	Confidence
Signal Peptide	1	38	0.76
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	300	0.99