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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|66851588, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGHRRDQES RPSCAMHAIK EMYSYLREPT YAKAHTNIFT ERQYLQEGIC RQGECVMGLG  60
   61 EKNVIRYQQP WSSYLIGLAN TLTGVVICGE RGQQLILPLT HPPCHLQDLI KMRRRITFVQ 120
  121 RPESPFHVDQ AVLTSDALSI THLDAAREER ATFGFDELPA EIWQVLKSSH ELHIRWATER 180
  181 PYEIGAPFSS RISPGLHVYY TPGTARETGV GLCSLLKTVF DESLECQSLR YYSRLPSLQN 240
  241 LVAFIQHKFC DRSDEKCVHH AESILSADSV DVNYDSISHA LTVSGYWSTS PGQGWTEQIR 300
  301 KHAADTHQVE VGLLGVESAT EPEELKMEPT LFSFPSRHHP LPADATYTVS FPAPTGLHPT 360
  361 LTISMPRASL RRPPAPPDAT CALHTYLTLP SWIFGDKYQL STTDRLFLSS HNLAALRAVA 420
  421 GETDLEAPDW VVSRWGSNWL LELATPLRPD TSPEEWNASI PLHLRYLTPS ESGYRSAAVP 480
  481 WPIVFWACTA EDGTKMGVNP FDRVNLGWEG LFGARTMFYQ LHPAPAEGKD RLVEELDVPV 540
  541 LRLREDAGFF QSKTIELGTV VVVGLGLLWV LWKLGLVLWI AGTGRSTRAQ KRTDKHRKAE 600
  601 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle