YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|66851434, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRIQNQLV SGSLLPYLSS TSSTSSTSST CISKLSQTCS SRPFCSSPAA QTRLRNEMFA  60
   61 WINGEGAQLK QHTPGRTNYI TRLKGNAGNR PFPLNPNFVS EPILSEELRN EIHRRVVDKK 120
  121 QSVRAVSVDL GVDMRRVAAV VRLVELEKRW KQQGKSLALP YARAVHEMVP TTPLRNDLNI 180
  181 RPHESINDLP VHRLTDPQIF YPVSESRQFT RVDAGRVFSA APALPHKEAE RAVAHPDEAI 240
  241 SKITQDPARI ERVGKGDDEQ QVLQPADVRI PHPHLVSHER QVKSNPNEFR ENMKLYRERL 300
  301 QQEEAIEQER KRLAKERAEQ RLVRVQPEGS RFEFRIKDVV VSRETTGTDG RGAQAPGRRY 360
  361 GVPTYDRKKG QIKIPTRVEV

Type	Start	End	Confidence
Signal Peptide	1	28	0.90
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	380	0.99